Search results for "Markov model"
showing 10 items of 113 documents
The gypsy database (GyDB) of mobile genetic elements: release 2.0
2011
This article introduces the second release of the Gypsy Database of Mobile Genetic Elements (GyDB 2.0): a research project devoted to the evolutionary dynamics of viruses and transposable elements based on their phylogenetic classification (per lineage and protein domain). The Gypsy Database (GyDB) is a long-term project that is continuously progressing, and that owing to the high molecular diversity of mobile elements requires to be completed in several stages. GyDB 2.0 has been powered with a wiki to allow other researchers participate in the project. The current database stage and scope are long terminal repeats (LTR) retroelements and relatives. GyDB 2.0 is an update based on the analys…
Coupled conditional backward sampling particle filter
2020
The conditional particle filter (CPF) is a promising algorithm for general hidden Markov model smoothing. Empirical evidence suggests that the variant of CPF with backward sampling (CBPF) performs well even with long time series. Previous theoretical results have not been able to demonstrate the improvement brought by backward sampling, whereas we provide rates showing that CBPF can remain effective with a fixed number of particles independent of the time horizon. Our result is based on analysis of a new coupling of two CBPFs, the coupled conditional backward sampling particle filter (CCBPF). We show that CCBPF has good stability properties in the sense that with fixed number of particles, …
A context-aware approach for long-term behavioural change detection and abnormality prediction in ambient assisted living
2015
This research aims to describe pattern recognition models for detecting behavioural and health-related changes in a patient who is monitored continuously in an assisted living environment. The early anticipation of anomalies can improve the rate of disease prevention. Here we present different learning techniques for predicting abnormalities and behavioural trends in various user contexts. In this paper we described a Hidden Markov Model based approach for detecting abnormalities in daily activities, a process of identifying irregularity in routine behaviours from statistical histories and an exponential smoothing technique to predict future changes in various vital signs. The outcomes of t…
Adaptation to life after surgical removal of the bladder—an application of graphical Markov models for analysing longitudinal data
2004
Graphical Markov models have been developed particularly for the analysis of observational data. They allow the control of various background variables when analysing theoretically relevant associations. This paper demonstrates the application and some advantages of graphical Markov models in comparison to conventional statistical analyses. The aim of the study was to identify patients at risk for developing decreased health-related quality of life (QoL) after cystectomy and to explore the influence of coping on QoL in this situation. Therefore, the method was applied to analyse the data of a prospective study, in which 81 patients with bladder cancer were interviewed pre-operatively and in…
Motion sensors for activity recognition in an ambient-intelligence scenario
2013
In recent years, Ambient Intelligence (AmI) has attracted a number of researchers due to the widespread diffusion of unobtrusive sensing devices. The availability of such a great amount of acquired data has driven the interest of the scientific community in producing novel methods for combining raw measurements in order to understand what is happening in the monitored scenario. Moreover, due the primary role of the end user, an additional requirement of any AmI system is to maintain a high level of pervasiveness. In this paper we propose a method for recognizing human activities by means of a time of flight (ToF) depth and RGB camera device, namely Microsoft Kinect. The proposed approach is…
El análisis cuantitativo de trayectorias laborales. Un estado del arte
2022
La metodología cuantitativa aplicada al estudio de las trayectorias laborales ha experimentado un rápido auge que se ha extendido más allá del tradicional análisis de secuencias. El presente artículo es un estado del arte del desarrollo de nuevas técnicas estadísticas que pueden aplicarse o ya se aplican al estudio de trayectorias laborales. Además, incluimos sugerencias de software estadístico para la aplicación de cada una de las técnicas descritas. A lo largo de todo el texto, podrá observarse que la descripción de cada técnica se ha realizado desde un punto de vista conceptual, con el objetivo de llegar a un público amplio, que no necesite poseer una fuerte formación estadística. Es med…
A Study of Perceptron Mapping Capability to Design Speech Event Detectors
2006
Event detection is a fundamental yet critical component in automatic speech recognition (ASR) systems that attempt to extract knowledge-based features at the front-end level. In this context, it is common practice to design the detectors inside well-known frameworks based on artificial neural network (ANN) or support vector machine (SVM). In the case of ANN, speech scientists often design their detector architecture relying on conventional feed-forward multi-layer perceptron (MLP) with sigmoidal activation function. The aim of this paper is to introduce other ANN architectures inside the context of detection-based ASR. In particular, a bank of feed-forward MLPs using sinusoidal activation f…
Textual data compression in computational biology: Algorithmic techniques
2012
Abstract In a recent review [R. Giancarlo, D. Scaturro, F. Utro, Textual data compression in computational biology: a synopsis, Bioinformatics 25 (2009) 1575–1586] the first systematic organization and presentation of the impact of textual data compression for the analysis of biological data has been given. Its main focus was on a systematic presentation of the key areas of bioinformatics and computational biology where compression has been used together with a technical presentation of how well-known notions from information theory have been adapted to successfully work on biological data. Rather surprisingly, the use of data compression is pervasive in computational biology. Starting from…
Dynamic Community Detection for Brain Functional Networks during Music Listening with Block Component Analysis
2023
Publisher Copyright: Author The human brain can be described as a complex network of functional connections between distinct regions, referred to as the brain functional network. Recent studies show that the functional network is a dynamic process and its community structure evolves with time during continuous task performance. Consequently, it is important for the understanding of the human brain to develop dynamic community detection techniques for such time-varying functional networks. Here, we propose a temporal clustering framework based on a set of network generative models and surprisingly it can be linked to Block Component Analysis to detect and track the latent community structure…
System times and channel availability analyses in multi-channel cognitive radio networks
2014
Channel accessibility by a secondary user (SU) in cognitive radio networks (CRNs) depends on the availability of the spectrum based on primary user and other SU activities. A new SU request may be blocked and an ongoing SU service may also be discarded if no sufficient spectrum is available. So far, little work has been done to analyze the reliability and availability aspects of CRNs from the perspective of the dependability theory. In this paper, we introduce the concept of availability for spectrum access in multi-channel CRNs, which is defined as the fraction of time that a CRN can allocate at least the minimum number of required channels for a new SU request. Through a proposed continuo…